Parallelize Computation of Indices 3 months ago
Running code in parallel | Performance comparison
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Performance Benchmark with other packages 3 months ago
Other packages to compute FD indices | Main functions | Benchmark between packages | Functional Dispersion (FDis) | Functional Divergence (FDiv) | Functional Evenness (FEve) | Functional Richness (FRic) | Functional Richness Intersection (FRic_intersect) | Rao's Quadratic Entropy (Q) | Benchmark within fundiversity | Increasing the number of species | Functional Richness | Functional Divergence | Rao's Quadratic Entropy | Functional Evenness | Comparing between indices | Increasing the number of sites | References
Overview of how to use fundiversity 2 years ago
Required data | Functional Richness (FRic) - fd_fric() | Functional volume intersect (FRic_intersect) - fd_fric_intersect() | Functional Divergence (FDiv) - fd_fdiv() | Functional Evenness (FEve) - fd_feve() | Functional Dispersion (FDis) - fd_fdis() | Rao's Quadratic Entropy (Q) - fd_raoq() | Large site-species data / sparse matrices | Standardizing trait data | Non-continuous traits? | Missing values in traits? | Functions summary table | References
Check Numerical Correctness of Indices 3 years ago
Changes of abundance | Changes of coordinates (= traits)
Design Principles for fundiversity 4 years ago
Scope | Dependencies | Functions | Each index should be computed in its own separate function | Input data should not be transformed without any explicit action from the user | Inputs | Outputs | Functions should output data.frames | The outputs of functions should be similar in structure
